Deep Learning-Based Automated Segmentation of the Parcellated Corpus Callosum in Brain MRI

Authors

  • Suliman Mohamed Fati College of Computer and Information Sciences, Prince Sultan University, Riyadh, Saudi Arabia
  • Omaia Al-Omari Department of Information Systems, College of Computer and Information Sciences, Prince Sultan University, Riyadh, Saudi Arabia https://orcid.org/0000-0002-1638-1771
Volume: 15 | Issue: 5 | Pages: 27357-27362 | October 2025 | https://doi.org/10.48084/etasr.11783

Abstract

This study proposed PCcS-RAU-Net, an enhanced deep learning model that integrates Residual Blocks and Attention Gates (AGs) into a U-Net architecture for segmenting the parcellated Corpus Callosum (Cc) into five anatomical regions: rostrum, genu, mid-body, isthmus, and splenium. The model was evaluated across three prominent datasets: ABIDE, OASIS, and Real Clinical Images (RCI), achieving 97.10%, 96.88%, and 97.11%, in terms of Dice Similarity Coefficients (DSCs), and corresponding Mean Intersection over Union (MIoU) scores of 94.43%, 93.89%, and 94.19% respectively. Additionally, this approach outperformed the classical U-Net, Residual U-Net, and Attention U-Net models, providing robustness and an effective general applicability concerning the different imaging protocols.

Keywords:

corpus callosum segmentation, deep learning, U-Net, residual learning, attention mechanisms, brain MRI

Downloads

Download data is not yet available.

References

R. Kucharsky Hiess, R. Alter, S. Sojoudi, B. A. Ardekani, R. Kuzniecky, and H. R. Pardoe, "Corpus Callosum Area and Brain Volume in Autism Spectrum Disorder: Quantitative Analysis of Structural MRI from the ABIDE Database," Journal of Autism and Developmental Disorders, vol. 45, no. 10, pp. 3107–3114, Jun. 2015.

A. W. Russo et al., "Associations between corpus callosum damage, clinical disability, and surface-based homologous inter-hemispheric connectivity in multiple sclerosis," Brain Structure and Function, vol. 227, no. 9, pp. 2909–2922, May 2022.

S. F. Witelson, "Hand and Sex Differences in the Isthmus and Genu of the Human Corpus Callosum: A Postmortem Morphological Study," Brain, vol. 112, no. 3, pp. 799–835, Jun. 1989.

S. Hofer and J. Frahm, "Topography of the human corpus callosum revisited—Comprehensive fiber tractography using diffusion tensor magnetic resonance imaging, " NeuroImage, vol. 32, no. 3, pp. 989–994, Sep. 2006.

O. Ronneberger, P. Fischer, and T. Brox, "U-Net: Convolutional Networks for Biomedical Image Segmentation," in Medical Image Computing and Computer-Assisted Intervention, Munich, Germany, Oct. 2015, pp. 234–241.

K. He, X. Zhang, S. Ren, and J. Sun, "Deep Residual Learning for Image Recognition, " in IEEE Conference on Computer Vision and Pattern Recognition, Las Vegas, NV, USA, 2016, pp. 770–778.

O. Oktay et al., "Attention U-Net: Learning Where to Look for the Pancreas." arXiv, May 20, 2018.

ABIDE dataset, https://sourceforge.net/projects/nidb/files/latest/download.

OASIS dataset, https://download.nrg.wustl.edu/data/OAS2_RAW_PART1.tar.gz.

A. Di Martino et al., "The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism, " Molecular Psychiatry, vol. 19, no. 6, pp. 659–667, 2014.

D. S. Marcus, T. H. Wang, J. Parker, J. G. Csernansky, J. C. Morris, and R. L. Buckner, "Open Access Series of Imaging Studies (OASIS): Cross-sectional MRI Data in Young, Middle Aged, Nondemented, and Demented Older Adults," Journal of Cognitive Neuroscience, vol. 19, no. 9, pp. 1498–1507, Sep. 2007.

S. Ioffe and C. Szegedy, "Batch Normalization: Accelerating Deep Network Training by Reducing Internal Covariate Shift," in Proceedings of the 32nd International Conference on Machine Learning, Lille, France, Jun. 2015, pp. 448–456.

C. Shorten and T. M. Khoshgoftaar, "A survey on Image Data Augmentation for Deep Learning, " Journal of Big Data, vol. 6, no. 1, Jul. 2019, Art. no. 60.

D. P. Kingma and J. Ba, "Adam: A Method for Stochastic Optimization." arXiv, Jan. 30, 2017.

K. He, X. Zhang, S. Ren, and J. Sun, "Delving Deep into Rectifiers: Surpassing Human-Level Performance on ImageNet Classification," in Santiago, Chile, 2015, pp. 1026–1034.

A. Alyousef and O. Al-Omari, "Artificial Intelligence in Healthcare: Bridging Innovation and Regulation," Journal of Ecohumanism, vol. 3, no. 8, pp. 10582–10589, 2024.

A. Rehman, M. Mujahid, A. Elyassih, B. AlGhofaily, and S. A. O. Bahaj, "Comprehensive Review and Analysis on Facial Emotion Recognition: Performance Insights into Deep and Traditional Learning with Current Updates and Challenges," Computers, Materials & Continua, vol. 82, no. 1, 2025, Art. no. 41.

N. A. Semary, W. Ahmed, K. Amin, P. Pławiak, and M. Hammad, "Improving sentiment classification using a RoBERTa-based hybrid model," Frontiers in Human Neuroscience, vol. 17, Dec. 2023.

E. Othman and R. Mahafdah, "Recalibrating Human–Machine Relations through Bias-Aware Machine Learning: Technical Pathways to Fairness and Trust, " Journal of Posthumanism, vol. 5, no. 4, pp. 448–466, 2025.

M. Rasool, A. Noorwali, H. Ghandorh, N. A. Ismail, and W. M. S. Yafooz, "Brain Tumor Classification using Deep Learning: A State-of-the-Art Review," Engineering, Technology & Applied Science Research, vol. 14, no. 5, pp. 16586–16594, Oct. 2024.

A. A. Taha and A. Hanbury, "Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool," BMC Medical Imaging, vol. 15, no. 1, Aug. 2015, Art. no. 29.

Downloads

How to Cite

[1]
S. M. Fati and O. Al-Omari, “Deep Learning-Based Automated Segmentation of the Parcellated Corpus Callosum in Brain MRI”, Eng. Technol. Appl. Sci. Res., vol. 15, no. 5, pp. 27357–27362, Oct. 2025.

Metrics

Abstract Views: 74
PDF Downloads: 25

Metrics Information